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Table 3 Frequency of occurrence and diversity indices for the sequence groups (SGs)

From: A cross-city molecular biogeographic investigation of arbuscular mycorrhizas in Conyza canadensis rhizosphere across native and non-native regions

Sequence groups (SG)

Closest relative found In GenBank

% Similarity

QAMF2

QAMF3

QAMF4

QAMF Average

IAMF1

IAMF2

IAMF3

IAMF Average

IAMFC1

IAMFC2

IAMFC3

IAMFC Average

1

Glomus caledonium Y17636

99

17

21

15

17.7

37

37

35

36.3

50

82

0

44.0

2

G. intraradices EU23266

99

0

0

0

0.0

0

0

0

0.0

38

0

0

12.7

3

G. mosseae AJ55616

99

0

0

0

0.0

0

0

2

0.7

0

0

0

0.0

4

G. constrictum AJ569

98

1

1

20

7.3

3

2

0

1.7

0

0

0

0.0

5

G. claroideum Y17636

98

0

0

0

0.0

0

1

4

1.7

0

0

0

0.0

6

G. cf. etunicatum Y17644

99

24

14

1

13.0

0

0

0

0.0

0

0

0

0.0

7

G. eburneum EF581879

99

0

0

11

3.7

0

0

0

0.0

0

0

0

0.0

8

Glomus sp. FN429112

99

0

0

0

0.0

0

0

0

0.0

2

0

0

0.7

9

G. versiforme X86687

99

0

8

0

2.7

0

0

0

0.0

0

0

0

0.0

10

Diversispora sp. FN429374

98

0

0

1

0.3

0

0

0

0.0

0

0

0

0.0

11

Diversisporaceae sp. AM400229

99

0

0

0

0.0

1

0

0

0.3

0

0

0

0.0

12

Glomus sp. AJ309457

99

0

0

0

0.0

2

0

0

0.7

0

4

0

1.3

 

TOTAL

 

42

44

48

44.667

43

40

41

46

90

86

0

88

      

Average

   

Average

   

Average

 

Shannon (H)

 

0.7749

1.1133

1.2272

1.4104

0.5452

0.3141

0.5095

0.6001

0.7752

0.1881

0.0000

0.6903

 

Pielou’s evenness (E)

 

0.7053

0.8031

0.7625

0.8763

0.3933

0.2859

0.4637

0.3728

0.7056

0.2714

0.0000

0.4979

 

Simpson (D)

 

0.5091

0.6374

0.6753

0.7200

0.2520

0.1413

0.2594

0.2596

0.5126

0.0887

1.0000

0.3947

  1. Based on the small subunit of rDNA of AMF from native (QAMF), invaded (IAMF), and control (IAMFC) samples.